The following is a list of software packages and applications for biocybernetics research.
Data formats and specifications
[edit]- Systems Biology Markup Language (SBML)
- Biological Pathway Exchange (BioPAX)
- CellML
- Minimum Information About a Simulation Experiment (MIASE)
- Minimum information required in the annotation of models (MIRIAM)
- Systems Biology Ontology (SBO)
- Systems Biology Graphical Notation (SBGN)
Libraries for software development
[edit]- CyberUnits, a class library for computer simulations in life sciences[1]
Software products
[edit]- SimThyr – Simulation system for thyroid homeostasis
See also
[edit]- List of sequence alignment software
- List of open-source healthcare software
- List of open-source bioinformatics software
- List of proprietary bioinformatics software
- List of freeware health software
- List of molecular graphics systems
- List of systems biology modeling software
- Comparison of software for molecular mechanics modeling
- BioLinux
Other collections
[edit]- PhysioToolkit Software Index: PhysioNet's software collection
References
[edit]- ^ "CyberUnits: An open library for computational cybernetics". cyberunits.sourceforge.net. Retrieved 17 April 2021.