Diel gene expression profiles of a phosphorus limited mountain lake using metatranscriptomics M Vila‐Costa, S Sharma, MA Moran, EO Casamayor Environmental microbiology 15 (4), 1190-1203, 2013 | 46 | 2013 |
Sizing up metatranscriptomics MA Moran, B Satinsky, SM Gifford, H Luo, A Rivers, LK Chan, J Meng, ... The ISME journal 7 (2), 237-243, 2013 | 315 | 2013 |
Expression patterns reveal niche diversification in a marine microbial assemblage SM Gifford, S Sharma, M Booth, MA Moran The ISME journal 7 (2), 281-298, 2013 | 176 | 2013 |
Incorporating genomic information and predicting gene expression patterns in a simplified biogeochemical model P Wang, AB Burd, MA Moran, RR Hood, VJ Coles, PL Yager Biogeosciences Discussions 10 (1), 815-850, 2013 | | 2013 |
Use of internal standards for quantitative metatranscriptome and metagenome analysis BM Satinsky, SM Gifford, BC Crump, MA Moran Methods in enzymology 531, 237-250, 2013 | 117 | 2013 |
Community analysis of high‐and low‐nucleic acid‐containing bacteria in NW Mediterranean coastal waters using 16S rDNA pyrosequencing M Vila‐Costa, JM Gasol, S Sharma, MA Moran Environmental microbiology 14 (6), 1390-1402, 2012 | 122 | 2012 |
Transcriptional changes underlying elemental stoichiometry shifts in a marine heterotrophic bacterium LK Chan, RJ Newton, S Sharma, CB Smith, P Rayapati, AJ Limardo, ... Frontiers in microbiology 3, 159, 2012 | 27 | 2012 |
Environmental, biochemical and genetic drivers of DMSP degradation and DMS production in the Sargasso Sea NM Levine, VA Varaljay, DA Toole, JWH Dacey, SC Doney, MA Moran Environmental microbiology 14 (5), 1210-1223, 2012 | 69 | 2012 |
Bacterial dimethylsulfoniopropionate degradation genes in the oligotrophic north pacific subtropical gyre VA Varaljay, SM Gifford, ST Wilson, S Sharma, DM Karl, MA Moran Applied and environmental microbiology 78 (8), 2775-2782, 2012 | 47 | 2012 |
Structures of dimethylsulfoniopropionate‐dependent demethylase from the marine organism Pelagabacter ubique DJ Schuller, CR Reisch, MA Moran, WB Whitman, WN Lanzilotta Protein science 21 (2), 289-298, 2012 | 30 | 2012 |
Genomic insights into bacterial DMSP transformations MA Moran, CR Reisch, RP Kiene, WB Whitman Annual review of marine science 4, 523-542, 2012 | 190 | 2012 |
Omics for understanding microbial functional dynamics JK Jansson, JD Neufeld, MA Moran, JA Gilbert Environmental microbiology 14 (1), 1-3, 2012 | 87 | 2012 |
Genome content of uncultivated marine Roseobacters in the surface ocean H Luo, A Löytynoja, MA Moran Environmental microbiology 14 (1), 41-51, 2012 | 52 | 2012 |
Bacterial community transcription patterns during a marine phytoplankton bloom JM Rinta‐Kanto, S Sun, S Sharma, RP Kiene, MA Moran Environmental microbiology 14 (1), 228-239, 2012 | 105 | 2012 |
Metatranscriptomic signature of exogenous polyamine utilization by coastal bacterioplankton X Mou, M Vila‐Costa, S Sun, W Zhao, S Sharma, MA Moran Environmental microbiology reports 3 (6), 798-806, 2011 | 56 | 2011 |
The Genetic Basis for Heterotrophic Carbon Processing in the Sea MA Moran USDOE Joint Genome Institute (JGI), Berkeley, CA (United States), 2011 | | 2011 |
Bromodeoxyuridine (BrdU) labeling and subsequent fluorescence activated cell sorting for culture-independent identification of dissolved organic carbon-degrading bacterioplankton S Robbins, J Jacob, X Lu, MA Moran, X Mou JoVE (Journal of Visualized Experiments), e2855, 2011 | 4 | 2011 |
Bacterial catabolism of dimethylsulfoniopropionate (DMSP) CR Reisch, MA Moran, WB Whitman Frontiers in microbiology 2, 172, 2011 | 238 | 2011 |
Novel pathway for assimilation of dimethylsulphoniopropionate widespread in marine bacteria CR Reisch, MJ Stoudemayer, VA Varaljay, IJ Amster, MA Moran, ... Nature 473 (7346), 208-211, 2011 | 166 | 2011 |
Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage JT Hollibaugh, S Gifford, S Sharma, N Bano, MA Moran The ISME Journal 5 (5), 866-878, 2011 | 127 | 2011 |
Quantitative analysis of a deeply sequenced marine microbial metatranscriptome SM Gifford, S Sharma, JM Rinta-Kanto, MA Moran The ISME journal 5 (3), 461-472, 2011 | 231 | 2011 |
Analysis of sulfur‐related transcription by Roseobacter communities using a taxon‐specific functional gene microarray JM Rinta‐Kanto, H Bürgmann, SM Gifford, S Sun, S Sharma, DA Del Valle, ... Environmental microbiology 13 (2), 453-467, 2011 | 37 | 2011 |
Changes in dimethylsulfoniopropionate demethylase gene assemblages in response to an induced phytoplankton bloom EC Howard, S Sun, CR Reisch, DA del Valle, H Bürgmann, RP Kiene, ... Applied and environmental microbiology 77 (2), 524-531, 2011 | 53 | 2011 |
Transcriptomic analysis of a marine bacterial community enriched with dimethylsulfoniopropionate M Vila-Costa, JM Rinta-Kanto, S Sun, S Sharma, R Poretsky, MA Moran The ISME journal 4 (11), 1410-1420, 2010 | 95 | 2010 |
TRANSCRIPTIONAL ANALYSIS OF A MARINE BACTERIA-PHYTOPLANKTON BINARY MODEL SYSTEM MA Moran USDOE Joint Genome Institute (JGI), Berkeley, CA (United States), 2010 | | 2010 |
PS 43-143: BrdU incorporation-based flow cytometric sorting and subsequent 16s rDNA pyrosequencing identify polyamine-utilizing bacterioplankton in coastal seawater X Lv, J Jacob, MA Moran, M Vila-costa, X Mou The 95th ESA Annual Meeting, 2010 | | 2010 |
Genome characteristics of a generalist marine bacterial lineage RJ Newton, LE Griffin, KM Bowles, C Meile, S Gifford, CE Givens, ... The ISME journal 4 (6), 784-798, 2010 | 405 | 2010 |
Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon RS Poretsky, S Sun, X Mou, MA Moran Environmental microbiology 12 (3), 616-627, 2010 | 244 | 2010 |
Genes for transport and metabolism of spermidine in Ruegeria pomeroyi DSS-3 and other marine bacteria X Mou, S Sun, P Rayapati, MA Moran Aquatic microbial ecology 58 (3), 311-321, 2010 | 30 | 2010 |
Deep Sequencing of a Dimethylsulfoniopropionate-Degrading Gene (dmdA) by Using PCR Primer Pairs Designed on the Basis of Marine Metagenomic Data VA Varaljay, EC Howard, S Sun, MA Moran Applied and environmental microbiology 76 (2), 609-617, 2010 | 86 | 2010 |
Changes in DMSP demethylase gene assemblages in response to an induced phytoplankton bloom EC Howard, S Sun, CR Reisch, DA Valle, RP Kiene, MA Moran Appl Environ Microbiol, 2010 | 2 | 2010 |
Analysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarrayemi_2350 JM Rinta-Kanto, H Bürgmann, SM Gifford, S Sun, S Sharma, DA del Valle, ... | | 2010 |
The Meta-Transcriptome of an Ammonia Oxidizing Archaea Bloom in Georgia Coastal Waters JT Hollibaugh, S Gifford, N Bano, S Sharmai, M Moran Proceedings from the 2010 AGU Ocean Sciences Meeting, 2010 | | 2010 |
Insights into dissolved organic carbon transformations through comparative metatranscriptomics of coastal marine bacterioplankton R Poretsky, S Sun, X Mou, M Moran Proceedings from the 2010 AGU Ocean Sciences Meeting, 2010 | | 2010 |
Genes for transport and metabolism of spermidine in Ruegeria pomeroyi DSS-3 and other marine bacteria (vol 58, pg 311, 2010) X Mou, S Sun, P Rayapati, MA Moran AQUATIC MICROBIAL ECOLOGY 59 (1), 102-102, 2010 | 1 | 2010 |
Microbial community response to seawater amendment in low-salinity tidal sediments JW Edmonds, NB Weston, SB Joye, X Mou, MA Moran Microbial ecology 58, 558-568, 2009 | 100 | 2009 |
The diverse bacterial community in intertidal, anaerobic sediments at Sapelo Island, Georgia C Lasher, G Dyszynski, K Everett, J Edmonds, W Ye, W Sheldon, S Wang, ... Microbial ecology 58, 244-261, 2009 | 37 | 2009 |
Metatranscriptomics: eavesdropping on complex microbial communities MA Moran Microbe 4 (7), 7, 2009 | 174 | 2009 |
Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre RS Poretsky, I Hewson, S Sun, AE Allen, JP Zehr, MA Moran Environmental microbiology 11 (6), 1358-1375, 2009 | 326 | 2009 |
In situ transcriptomic analysis of the globally important keystone N2-fixing taxon Crocosphaera watsonii I Hewson, RS Poretsky, RA Beinart, AE White, T Shi, SR Bench, ... The ISME journal 3 (5), 618-631, 2009 | 82 | 2009 |
Analyzing gene expression from marine microbial communities using environmental transcriptomics RS Poretsky, S Gifford, J Rinta-Kanto, M Vila-Costa, MA Moran JoVE (Journal of Visualized Experiments), e1086, 2009 | 74 | 2009 |
How to use a crystal ball in environmental microbiology: developing new ways to explore complex datasets A Ramette, A Boetius Environmental Microbiology Reports 1 (1), 3-26, 2009 | 1 | 2009 |
Analyzing Gene Expression from Marine Microbial Communities using Environmental RS Poretsky, S Gifford, J Rinta-Kanto, M Vila-Costa, MA Moran | | 2009 |
Dimethylsulfoniopropionate-Dependent Demethylase (DmdA) from Pelagibacter ubique and Silicibacter pomeroyi CR Reisch, MA Moran, WB Whitman Journal of bacteriology 190 (24), 8018-8024, 2008 | 130 | 2008 |
Correlating Geochemical and Deep Sequence Data: An Example from the Uzon Caldera, Kamchatka DE Crowe, ID Wagner, X Mou, W Ye, S Sun, CS Romanek, MA Moran AGU Fall Meeting Abstracts 2008, B53D-05, 2008 | | 2008 |
Abundant and diverse bacteria involved in DMSP degradation in marine surface waters EC Howard, S Sun, EJ Biers, MA Moran Environmental microbiology 10 (9), 2397-2410, 2008 | 184 | 2008 |
Toward a standards-compliant genomic and metagenomic publication record GM Garrity, D Field, N Kyrpides, L Hirschman, SA Sansone, S Angiuoli, ... OMICS A Journal of Integrative Biology 12 (2), 157-160, 2008 | 38 | 2008 |
Genomics and metagenomics of marine prokaryotes MA Moran Microbial ecology of the oceans, 91-129, 2008 | 21 | 2008 |
Occurrence and expression of gene transfer agent genes in marine bacterioplankton EJ Biers, K Wang, C Pennington, R Belas, F Chen, MA Moran Applied and environmental microbiology 74 (10), 2933-2939, 2008 | 118 | 2008 |
Using DNA technology to explore marine bacterial diversity in a coastal Georgia salt marsh Y Dong, S Guerrero, MA Moran The American biology teacher 70 (5), 279-283, 2008 | 9 | 2008 |
Functional metagenomic profiling of nine biomes EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ... Nature 452 (7187), 629-632, 2008 | 1119 | 2008 |
Towards a standards-compliant genomic and metagenomic publication record MW Fenner, GM Garrity, D Field, N Kyrpides, L Hirschman, SA San-sone, ... OMICS Journal, 2008 | | 2008 |
Variation in prokaryotic community composition as a function of resource availability in tidal creek sediments JW Edmonds, NB Weston, SB Joye, MA Moran Applied and environmental microbiology 74 (6), 1836-1844, 2008 | 22 | 2008 |
Bacterial carbon processing by generalist species in the coastal ocean X Mou, S Sun, RA Edwards, RE Hodson, MA Moran Nature 451 (7179), 708-711, 2008 | 324 | 2008 |
Transcriptional response of Silicibacter pomeroyi DSS‐3 to dimethylsulfoniopropionate (DMSP) H Bürgmann, EC Howard, W Ye, F Sun, S Sun, S Napierala, MA Moran Environmental microbiology 9 (11), 2742-2755, 2007 | 64 | 2007 |
Modern microbial seascapes DM Karl, BB Jørgensen, A Boetius, F Azam, F Malfatti, MA Moran, ... nATURE REvIEws| microbiology 5, 755, 2007 | | 2007 |
Resourceful heterotrophs make the most of light in the coastal ocean MA Moran, WL Miller Nature Reviews Microbiology 5 (10), 792-800, 2007 | 196 | 2007 |
Bacterioplankton assemblages transforming dissolved organic compounds in coastal seawater X Mou, RE Hodson, MA Moran Environmental microbiology 9 (8), 2025-2037, 2007 | 73 | 2007 |
Ecological genomics of marine Roseobacters MA Moran, R Belas, MA Schell, JM González, F Sun, S Sun, BJ Binder, ... Applied and environmental microbiology 73 (14), 4559-4569, 2007 | 405 | 2007 |
Genomes of sea microbes MA Moran, EV ARMBRUST Oceanography 20 (2), 47-55, 2007 | 10 | 2007 |
The role of nitrogen in chromophoric and fluorescent dissolved organic matter formation EJ Biers, RG Zepp, MA Moran Marine Chemistry 103 (1-2), 46-60, 2007 | 81 | 2007 |
NJ Drenzek, DB Montluçon, MB Yunker, RW Macdonald and TI Eglinton........................ 146 A new method for continuous measurements of O2 in surface water in combination … H Tazoe, H Obata, H Amakawa, Y Nozaki, T Gamo, J Peng, EY Zeng, ... Marine Chemistry 103, 410-411, 2007 | | 2007 |
Comparison of chitinolytic enzymes from an alkaline, hypersaline lake and an estuary GR LeCleir, A Buchan, J Maurer, MA Moran, JT Hollibaugh Environmental microbiology 9 (1), 197-205, 2007 | 60 | 2007 |
Bacterial taxa that limit sulfur flux from the ocean EC Howard, JR Henriksen, A Buchan, CR Reisch, H Bürgmann, ... Science 314 (5799), 649-652, 2006 | 387 | 2006 |
Environmental transcriptomics: a method to access expressed genes in complex microbial communities RS Poretsky, N Bano, A Buchan, JT Hollibaugh, MA Moran Molecular Microbial Ecology Manual, 1892-1904, 2006 | 5 | 2006 |
Dimethylsulfoniopropionate turnover is linked to the composition and dynamics of the bacterioplankton assemblage during a microcosm phytoplankton bloom J Pinhassi, R Simó, JM González, M Vila, L Alonso-Sáez, RP Kiene, ... Applied and environmental microbiology 71 (12), 7650-7660, 2005 | 86 | 2005 |
Screening for bacterial–fungal associations in a south-eastern US salt marsh using pre-established fungal monocultures JI Lyons, SY Newell, RP Brown, MA Moran FEMS microbiology ecology 54 (2), 179-187, 2005 | 14 | 2005 |
Variations in the spectral properties of freshwater and estuarine CDOM caused by partitioning onto river and estuarine sediments GC Shank, RG Zepp, RF Whitehead, MA Moran Estuarine, Coastal and Shelf Science 65 (1-2), 289-301, 2005 | 58 | 2005 |
Overview of the marine Roseobacter lineage A Buchan, JM González, MA Moran Applied and environmental microbiology 71 (10), 5665-5677, 2005 | 968 | 2005 |
Analysis of microbial gene transcripts in environmental samples RS Poretsky, N Bano, A Buchan, G LeCleir, J Kleikemper, M Pickering, ... Applied and Environmental Microbiology 71 (7), 4121-4126, 2005 | 294 | 2005 |
Sources, bioavailability, and photoreactivity of dissolved organic carbon in the Sacramento–San Joaquin River Delta R Stepanauskas, MA Moran, BA Bergamaschi, JT Hollibaugh Biogeochemistry 74, 131-149, 2005 | 59 | 2005 |
Flow-cytometric cell sorting and subsequent molecular analyses for culture-independent identification of bacterioplankton involved in dimethylsulfoniopropionate transformations X Mou, MA Moran, R Stepanauskas, JM González, RE Hodson Applied and environmental microbiology 71 (3), 1405-1416, 2005 | 51 | 2005 |
Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment MA Moran, A Buchan, JM González, JF Heidelberg, WB Whitman, ... Nature 432 (7019), 910-913, 2004 | 508 | 2004 |
Chromophoric dissolved organic matter (CDOM) source characterization in the Louisiana Bight RF Chen, P Bissett, P Coble, R Conmy, GB Gardner, MA Moran, X Wang, ... Marine Chemistry 89 (1-4), 257-272, 2004 | 128 | 2004 |
Dissolved organic fluorophores in southeastern US coastal waters: correction method for eliminating Rayleigh and Raman scattering peaks in excitation–emission matrices RG Zepp, WM Sheldon, MA Moran Marine chemistry 89 (1-4), 15-36, 2004 | 564 | 2004 |
Use of microautoradiography combined with fluorescence in situ hybridization to determine dimethylsulfoniopropionate incorporation by marine bacterioplankton taxa M Vila, R Simó, RP Kiene, J Pinhassi, JM González, MA Moran, ... Applied and Environmental Microbiology 70 (8), 4648-4657, 2004 | 117 | 2004 |
Effects of Biological and Photochemical Degradation on the Optical Properties of CDOM Exported to Coastal Marine Environments MA Moran, RG Zepp, WS Sheldon, D Koopmans, ... | | 2004 |
Diverse Organization of Genes of the β-Ketoadipate Pathway in Members of the Marine Roseobacter Lineage A Buchan, EL Neidle, MA Moran Applied and environmental microbiology 70 (3), 1658-1668, 2004 | 57 | 2004 |
MICROBIAL ECOLOGY-Use of Microautoradiography Combined with Fluorescence In Situ Hybridization To Determine Dimethylsulfoniopropionate Incorporation by Marine Bacterioplankton Taxa M Vila, R Simo, RP Kiene, J Pinhassi, JM Gonzalez, MA Moran, ... Applied and Environmental Microbiology 70 (8), 4648-4657, 2004 | 1 | 2004 |
CDOM in the Ocean: Characterization, Distribution and Transformation PG Coble, RG Zepp, RG ZIKA, J Boehme, P Coble, R Conmy, ... Elsevier, 2004 | | 2004 |
Dynamics of bacterial and fungal communities on decaying salt marsh grass A Buchan, SY Newell, M Butler, EJ Biers, JT Hollibaugh, MA Moran Applied and Environmental Microbiology 69 (11), 6676-6687, 2003 | 162 | 2003 |
Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments JM Gonzalez, JS Covert, WB Whitman, JR Henriksen, F Mayer, B Scharf, ... International journal of systematic and evolutionary microbiology 53 (5 …, 2003 | 280 | 2003 |
Linking a bacterial taxon to sulfur cycling in the sea: studies of the marine Roseobacter group MA Moran, JM González, RP Kiene Geomicrobiology Journal 20 (4), 375-388, 2003 | 160 | 2003 |
Diversity of ascomycete laccase gene sequences in a southeastern US salt marsh JI Lyons, SY Newell, A Buchan, MA Moran Microbial ecology 45, 270-281, 2003 | 111 | 2003 |
Covariance of bacterioplankton composition and environmental variables in a temperate delta system R Stepanauskas, MA Moran, BA Bergamaschi, JT Hollibaugh Aquatic Microbial Ecology 31 (1), 85-98, 2003 | 154 | 2003 |
NEW TAXA-Proteobacteria-Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments JM Gonzalez, JS Covert, WB Whitman, JR Henriksen, F Mayer, B Scharf, ... International Journal of Systematic and Evolutionary Microbiology 53 (5 …, 2003 | | 2003 |
Photochemically mediated linkages between dissolved organic matter and bacterioplankton MA Moran, JS Covert Aquatic Ecosystems, 243-262, 2003 | 98 | 2003 |
Temporal dynamics of three culturable γ-Proteobacteria taxa in salt marsh sediments EO Hardwick, W Ye, M Ann Moran, RE Hodson Aquatic Ecology 37, 55-64, 2003 | 9 | 2003 |
Efforts to link ecological metadata with bacterial gene sequences at the Sapelo Island Microbial Observatory WM Sheldon, MA Moran, JT Hollibaugh Proceedings of the 6th World Multiconference on Systemics, Cybernetics, and …, 2002 | 5 | 2002 |
Analysis of internal transcribed spacer (ITS) regions of rRNA genes in fungal communities in a southeastern US salt marsh A Buchan, SY Newell, JIL Moreta, MA Moran Microbial Ecology, 329-340, 2002 | 160 | 2002 |
Determination of apparent quantum yield spectra for the formation of biologically labile photoproducts WL Miller, M Moran, WM Sheldon, RG Zepp, S Opsahl Limnology and Oceanography 47 (2), 343-352, 2002 | 174 | 2002 |
Microbial Research: Progress and Potential MA Moran, SL Cady NSF microbial observatory/life in extreme environments principal …, 2002 | 1 | 2002 |
Oxidation of organic and inorganic sulfur compounds by aerobic heterotrophic marine bacteria JM González, RP Kiene, SB Joye, DY Sorokin, MA Moran Progress in Industrial Microbiology 36, 291-310, 2002 | 6 | 2002 |
Molecular characterization of bacterial and fungal decomposer communities in a southeastern US saltmarsh A Buchan, SY Newell, JI Moreta, MA Moran Microb Ecol 43, 329-340, 2002 | 7 | 2002 |
Diversity of the Ring-Cleaving Dioxygenase GenepcaH in a Salt Marsh Bacterial Community A Buchan, EL Neidle, MA Moran Applied and environmental microbiology 67 (12), 5801-5809, 2001 | 77 | 2001 |
Implementation of SABSOON H Seim, J Bane, F Werner, J Blanton, R Jahnke, J Nelson, GA Paffenhofer, ... | | 2001 |
Molecular characterization of estuarine bacterial communities that use high-and low-molecular weight fractions of dissolved organic carbon JS Covert, MA Moran Aquatic Microbial Ecology 25 (2), 127-139, 2001 | 148 | 2001 |
Interaction of Biological and Photochemical Processes in the Degradation of Terrestrial DOM in the Coastal Zone MA Moran CARBON STORAGE IN THE COASTAL ZONE, 21, 2001 | | 2001 |
Identification and characterization of humic substances-degrading bacterial isolates from an estuarine environment EC Esham, W Ye, MA Moran FEMS microbiology ecology 34 (2), 103-111, 2000 | 49 | 2000 |
Key Aromatic-Ring-Cleaving Enzyme, Protocatechuate 3,4-Dioxygenase, in the Ecologically Important MarineRoseobacter Lineage A Buchan, LS Collier, EL Neidle, MA Moran Applied and Environmental Microbiology 66 (11), 4662-4672, 2000 | 177 | 2000 |