| Holophagae | |
|---|---|
Scientific classification 
| |
| Domain: | Bacteria |
| Phylum: | Acidobacteriota |
| Class: | Holophagae Fukunaga et al. 2008[1] |
| Type genus | |
| Holophaga Liesack et al. 1995
| |
| Orders[2] | |
| |
| Synonyms | |
| |
Holophagae is a class of Acidobacteriota.[1]
Phylogeny[edit]
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature.[2] Numbered orders do not yet have any cultured representatives.
| 16S rRNA based phylogeny[3] | 16S rRNA based LTP_08_2023[4][5][6] | 120 marker proteins based GTDB 08-RS214[7][8][9] | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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See also[edit]
References[edit]
- ^ a b Fukunaga Y, Kurahashi M, Yanagi K, Yokota A, Harayama S. (2008). "Acanthopleuribacter pedis gen. nov., sp. nov., a marine bacterium isolated from a chiton, and description of Acanthopleuribacteraceae fam. nov., Acanthopleuribacterales ord. nov., Holophagaceae fam. nov., Holophagales ord. nov. and Holophagae classis nov. in the phylum "Acidobacteria"". Int J Syst Evol Microbiol. 58 (Pt 11): 2597–2601. doi:10.1099/ijs.0.65589-0. PMID 18984699.
- ^ a b Euzéby JP, Parte AC. "Holophagae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved May 8, 2022.
- ^ Dedysh SN, Yilmaz P. (2018). "Refining the taxonomic structure of the phylum Acidobacteria". Int J Syst Evol Microbiol. 68 (12): 3796–3806. doi:10.1099/ijsem.0.003062. PMID 30325293. S2CID 53502177.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.