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Epigenetic regulation by long noncoding RNAs

JT Lee - Science, 2012 - science.org
Recent studies show that transcription of the mammalian genome is not only pervasive but
also enormously complex. It is estimated that an average of 10 transcription units, the vast …

Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes, including nomenclature recommendations for genes, pseudogenes and …

DR Nelson, DC Zeldin, SMG Hoffman… - Pharmacogenetics …, 2004 - journals.lww.com
Objectives Completion of both the mouse and human genome sequences in the private and
public sectors has prompted comparison between the two species at multiple levels. This …

[PDF][PDF] Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs

G Meister, M Landthaler, A Patkaniowska, Y Dorsett… - Molecular cell, 2004 - cell.com
Argonaute proteins associate with small RNAs that guide mRNA degradation, translational
repression, or a combination of both. The human Argonaute family has eight members, four …

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes

T Watanabe, Y Totoki, A Toyoda, M Kaneda… - Nature, 2008 - nature.com
RNA interference (RNAi) is a mechanism by which double-stranded RNAs (dsRNAs)
suppress specific transcripts in a sequence-dependent manner. dsRNAs are processed by …

[HTML][HTML] Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture

LC Laurent, I Ulitsky, I Slavin, H Tran, A Schork… - Cell stem cell, 2011 - cell.com
Genomic stability is critical for the clinical use of human embryonic and induced pluripotent
stem cells. We performed high-resolution SNP (single-nucleotide polymorphism) analysis on …

RNA regulation: a new genetics?

JS Mattick - Nature Reviews Genetics, 2004 - nature.com
Do non-coding RNAs that are derived from the introns and exons of protein-coding and non-
protein-coding genes represent a fundamental advance in the genetic operating system of …

[BOOK][B] Genetics and philosophy: An introduction

P Griffiths, K Stotz - 2013 - books.google.com
In the past century, nearly all of the biological sciences have been directly affected by
discoveries and developments in genetics, a fast-evolving subject with important theoretical …

Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome

K Yamada, J Lim, JM Dale, H Chen, P Shinn, CJ Palm… - science, 2003 - science.org
Functional analysis of a genome requires accurate gene structure information and a
complete gene inventory. A dual experimental strategy was used to verify and correct the …

Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

KC Pang, MC Frith, JS Mattick - Trends in genetics, 2006 - cell.com
The mammalian transcriptome contains many non-protein-coding RNAs (ncRNAs), but most
of these are of unclear significance and lack strong sequence conservation, prompting …

[HTML][HTML] Regulating gene expression through RNA nuclear retention

KV Prasanth, SG Prasanth, Z Xuan, S Hearn, SM Freier… - Cell, 2005 - cell.com
Multiple mechanisms have evolved to regulate the eukaryotic genome. We have identified
CTN-RNA, a mouse tissue-specific∼ 8 kb nuclear-retained poly (A)+ RNA that regulates the …

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