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Ubiquitin modifications
KN Swatek, D Komander - Cell research, 2016 - nature.com
Protein ubiquitination is a dynamic multifaceted post-translational modification involved in
nearly all aspects of eukaryotic biology. Once attached to a substrate, the 76-amino acid …
nearly all aspects of eukaryotic biology. Once attached to a substrate, the 76-amino acid …
[PDF][PDF] The logic of the 26S proteasome
GA Collins, AL Goldberg - Cell, 2017 - cell.com
The ubiquitin proteasome pathway is responsible for most of the protein degradation in
mammalian cells. Rates of degradation by this pathway have generally been assumed to be …
mammalian cells. Rates of degradation by this pathway have generally been assumed to be …
[HTML][HTML] RELION: implementation of a Bayesian approach to cryo-EM structure determination
SHW Scheres - Journal of structural biology, 2012 - Elsevier
RELION, for REgularized LIkelihood OptimizatioN, is an open-source computer program for
the refinement of macromolecular structures by single-particle analysis of electron cryo …
the refinement of macromolecular structures by single-particle analysis of electron cryo …
Quantifying the local resolution of cryo-EM density maps
A Kucukelbir, FJ Sigworth, HD Tagare - Nature methods, 2014 - nature.com
We propose a definition of local resolution for three-dimensional electron cryo-microscopy
(cryo-EM) density maps that uses local sinusoidal features. Our algorithm has no free …
(cryo-EM) density maps that uses local sinusoidal features. Our algorithm has no free …
Proteasomal and autophagic degradation systems
I Dikic - Annual review of biochemistry, 2017 - annualreviews.org
Autophagy and the ubiquitin–proteasome system are the two major quality control pathways
responsible for cellular homeostasis. As such, they provide protection against age …
responsible for cellular homeostasis. As such, they provide protection against age …
Mechanisms of deubiquitinase specificity and regulation
TET Mevissen, D Komander - Annual review of biochemistry, 2017 - annualreviews.org
Protein ubiquitination is one of the most powerful posttranslational modifications of proteins,
as it regulates a plethora of cellular processes in distinct manners. Simple …
as it regulates a plethora of cellular processes in distinct manners. Simple …
Structure and function of the 26S proteasome
As the endpoint for the ubiquitin-proteasome system, the 26S proteasome is the principal
proteolytic machine responsible for regulated protein degradation in eukaryotic cells. The …
proteolytic machine responsible for regulated protein degradation in eukaryotic cells. The …
Chaperone machines for protein folding, unfolding and disaggregation
H Saibil - Nature reviews Molecular cell biology, 2013 - nature.com
Molecular chaperones are diverse families of multidomain proteins that have evolved to
assist nascent proteins to reach their native fold, protect subunits from heat shock during the …
assist nascent proteins to reach their native fold, protect subunits from heat shock during the …
Regulation of proteasome assembly and activity in health and disease
A Rousseau, A Bertolotti - Nature reviews Molecular cell biology, 2018 - nature.com
The proteasome degrades most cellular proteins in a controlled and tightly regulated
manner and thereby controls many processes, including cell cycle, transcription, signalling …
manner and thereby controls many processes, including cell cycle, transcription, signalling …
[HTML][HTML] Crosstalk between mammalian autophagy and the ubiquitin-proteasome system
NM Kocaturk, D Gozuacik - Frontiers in cell and developmental …, 2018 - frontiersin.org
Autophagy and the ubiquitin–proteasome system (UPS) are the two major intracellular
quality control and recycling mechanisms that are responsible for cellular homeostasis in …
quality control and recycling mechanisms that are responsible for cellular homeostasis in …